Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytidine deaminase | DW048_01540 | Not Available | Negative | 327582 - 328061 | 17702.2 |
| hypothetical protein | DW048_01545 | Not Available | Positive | 328281 - 328604 | 11453.6 |
| duf4476 domain-containing protein | DW048_01555 | Not Available | Negative | 329318 - 329980 | 25036.2 |
| hypothetical protein | DW048_01560 | Not Available | Positive | 330206 - 330817 | 22730.4 |
| hypothetical protein | DW048_01565 | Not Available | Positive | 330826 - 331473 | 23093.4 |
| hypothetical protein | DW048_01570 | Not Available | Positive | 331493 - 332728 | 46374.8 |
| hypothetical protein | DW048_01575 | Not Available | Positive | 332740 - 333066 | 11735.0 |
| hypothetical protein | DW048_01580 | Not Available | Positive | 333072 - 333407 | 12299.6 |
| hypothetical protein | DW048_01585 | Not Available | Positive | 333409 - 333741 | 12428.5 |
| hypothetical protein | DW048_01595 | Not Available | Positive | 334198 - 334626 | 16327.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

