Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s6 | DW048_17775 | Not Available | Negative | 4088942 - 4089286 | 13428.3 |
| marr family transcriptional regulator | DW048_17780 | Not Available | Positive | 4089550 - 4089996 | 17228.0 |
| hypothetical protein | DW048_17785 | Not Available | Positive | 4090105 - 4090287 | 6168.02 |
| dna-binding response regulator | DW048_17790 | Not Available | Negative | 4090363 - 4091061 | 26811.6 |
| sensor histidine kinase | DW048_17795 | Not Available | Negative | 4091063 - 4092631 | 59676.4 |
| radical sam family heme chaperone hemw | DW048_17805 | Not Available | Positive | 4095289 - 4096419 | 43549.6 |
| sialate o-acetylesterase | DW048_17810 | Not Available | Negative | 4096573 - 4098510 | 72324.6 |
| glycosyhydrolase | DW048_17820 | Not Available | Negative | 4100579 - 4103173 | 99413.9 |
| glycoside hydrolase | DW048_17825 | Not Available | Negative | 4103186 - 4104769 | 60360.7 |
| hypothetical protein | DW048_17835 | Not Available | Positive | 4107309 - 4107500 | 7501.54 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

