Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor | DW048_17695 | Not Available | Positive | 4064169 - 4064750 | 22694.6 |
| duf4974 domain-containing protein | DW048_17700 | Not Available | Positive | 4064880 - 4065866 | 38650.5 |
| ragb/susd family nutrient uptake outer membrane protein | DW048_17725 | Not Available | Negative | 4076552 - 4078369 | 68259.8 |
| glycosyltransferase family 2 protein | DW048_17740 | Not Available | Negative | 4082777 - 4083802 | 39378.6 |
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | DW048_17745 | Not Available | Negative | 4083838 - 4085154 | 49152.8 |
| long-chain fatty acid--coa ligase | DW048_17750 | Not Available | Positive | 4085260 - 4086933 | 63271.5 |
| hypothetical protein | DW048_17755 | Not Available | Positive | 4087094 - 4087294 | 6663.71 |
| hypothetical protein | DW048_17760 | Not Available | Positive | 4087449 - 4088141 | 26978.2 |
| 50s ribosomal protein l9 | DW048_17765 | Not Available | Negative | 4088211 - 4088654 | 16159.9 |
| 30s ribosomal protein s18 | DW048_17770 | Not Available | Negative | 4088670 - 4088939 | 10561.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

