Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 4037863 - 4037946 | Not Available |
| duf3316 domain-containing protein | DW048_17620 | Not Available | Negative | 4039051 - 4039896 | 31970.1 |
| dna gyrase/topoisomerase iv subunit a | DW048_17625 | Not Available | Negative | 4039900 - 4042593 | 102664.0 |
| aspartate-semialdehyde dehydrogenase | DW048_17640 | Not Available | Negative | 4045414 - 4046424 | 37267.8 |
| trna threonylcarbamoyladenosine dehydratase | DW048_17650 | Not Available | Positive | 4048723 - 4049445 | 27062.2 |
| abc transporter atp-binding protein | DW048_17655 | Not Available | Positive | 4049448 - 4050107 | 23931.2 |
| tonb-dependent receptor | DW048_17665 | Not Available | Positive | 4051283 - 4054528 | 119608.0 |
| methylmalonyl-coa mutase small subunit | DW048_17680 | Not Available | Negative | 4058513 - 4060423 | 70522.5 |
| putative transporter | DW048_17685 | Not Available | Positive | 4060709 - 4062379 | 60144.9 |
| abc transporter atp-binding protein | DW048_17690 | Not Available | Positive | 4062495 - 4064129 | 61961.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

