Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar o-acetyltransferase | DW048_17440 | Not Available | Positive | 4000403 - 4000978 | 20877.8 |
| hypothetical protein | DW048_17445 | Not Available | Negative | 4001000 - 4001179 | 6327.56 |
| duf3737 family protein | DW048_17455 | Not Available | Positive | 4002628 - 4003494 | 33258.2 |
| pyridoxal phosphate-dependent aminotransferase | DW048_17460 | Not Available | Positive | 4003504 - 4004667 | 44389.1 |
| hypothetical protein | DW048_17465 | Not Available | Negative | 4004759 - 4004968 | 8234.29 |
| arsr family transcriptional regulator | DW048_17470 | Not Available | Positive | 4005189 - 4005515 | 12236.9 |
| thioredoxin family protein | DW048_17475 | Not Available | Positive | 4005593 - 4005826 | 8315.35 |
| thioredoxin | DW048_17480 | Not Available | Positive | 4005837 - 4006280 | 16803.2 |
| sulfite exporter taue/safe family protein | DW048_17485 | Not Available | Positive | 4006282 - 4006989 | 25781.8 |
| arsenical resistance operon transcriptional repressor arsd | DW048_17490 | Not Available | Positive | 4007025 - 4007351 | 12047.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

