Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW048_17380 | Not Available | Positive | 3986599 - 3986844 | 9435.41 |
| had family hydrolase | DW048_17385 | Not Available | Negative | 3986841 - 3987530 | 26422.9 |
| duf1016 family protein | DW048_17395 | Not Available | Negative | 3988421 - 3989212 | 30378.6 |
| sam-dependent dna methyltransferase | DW048_17400 | Not Available | Negative | 3989216 - 3990634 | 53051.5 |
| dead/deah box helicase | DW048_17405 | Not Available | Negative | 3990639 - 3993341 | 102533.0 |
| duf262 domain-containing protein | DW048_17410 | Not Available | Negative | 3993408 - 3995147 | 68104.5 |
| xre family transcriptional regulator | DW048_17415 | Not Available | Negative | 3995215 - 3995418 | 7754.65 |
| hypothetical protein | DW048_17425 | Not Available | Negative | 3996934 - 3998601 | 64807.9 |
| alpha/beta hydrolase | DW048_17430 | Not Available | Positive | 3998867 - 3999736 | 32862.5 |
| hypothetical protein | DW048_17435 | Not Available | Positive | 4000101 - 4000388 | 10650.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

