Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine/betaine abc transporter substrate-binding protein | DW048_17325 | Not Available | Negative | 3975330 - 3976172 | 31651.2 |
| proline/glycine betaine abc transporter permease | DW048_17330 | Not Available | Negative | 3976175 - 3976999 | 29506.7 |
| glycine betaine/l-proline abc transporter atp-binding protein | DW048_17335 | Not Available | Negative | 3976996 - 3978222 | 45622.3 |
| sigma-54-dependent fis family transcriptional regulator | DW048_17340 | Not Available | Positive | 3978523 - 3979860 | 50007.5 |
| hypothetical protein | DW048_17345 | Not Available | Negative | 3979900 - 3980022 | 4390.24 |
| o-acetyl-adp-ribose deacetylase | DW048_17350 | Not Available | Negative | 3980251 - 3980877 | 22653.3 |
| potassium-transporting atpase subunit f | DW048_17355 | Not Available | Positive | 3981145 - 3981225 | 3136.13 |
| k+-transporting atpase subunit a | DW048_17360 | Not Available | Positive | 3981252 - 3982958 | 61976.5 |
| k(+)-transporting atpase subunit b | DW048_17365 | Not Available | Positive | 3982992 - 3985025 | 72534.1 |
| hypothetical protein | DW048_17375 | Not Available | Positive | 3985881 - 3986582 | 25488.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

