Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal recognition particle-docking protein ftsy | DW048_17275 | Not Available | Negative | 3968908 - 3969867 | 34716.9 |
| duf4295 domain-containing protein | DW048_17280 | Not Available | Negative | 3970041 - 3970196 | 5827.19 |
| 50s ribosomal protein l33 | DW048_17285 | Not Available | Negative | 3970206 - 3970394 | 7205.97 |
| 50s ribosomal protein l28 | DW048_17290 | Not Available | Negative | 3970415 - 3970675 | 9789.04 |
| cina family protein | DW048_17295 | Not Available | Negative | 3970780 - 3971280 | 17534.8 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | DW048_17300 | Not Available | Negative | 3971302 - 3972321 | 36941.3 |
| type i methionyl aminopeptidase | DW048_17305 | Not Available | Negative | 3972345 - 3973199 | 31838.1 |
| hypothetical protein | DW048_17310 | Not Available | Positive | 3973436 - 3973654 | 8234.71 |
| sugar o-acetyltransferase | DW048_17315 | Not Available | Negative | 3973714 - 3974265 | 20098.3 |
| dmt family transporter | DW048_17320 | Not Available | Negative | 3974278 - 3975186 | 34069.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

