Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atpase | DW048_01465 | Not Available | Negative | 308108 - 309706 | 57774.1 |
| nudix hydrolase | DW048_01480 | Not Available | Negative | 312132 - 312809 | 26233.5 |
| galactose mutarotase | DW048_01490 | Not Available | Negative | 314653 - 315807 | 41965.6 |
| galactokinase | DW048_01495 | Not Available | Negative | 316004 - 317158 | 42994.0 |
| mfs transporter | DW048_01500 | Not Available | Negative | 317199 - 318539 | 47498.5 |
| galactose mutarotase | DW048_01505 | Not Available | Negative | 318586 - 319680 | 39959.6 |
| molecular chaperone dnaj | DW048_01515 | Not Available | Negative | 321155 - 322330 | 42201.2 |
| nucleotide exchange factor grpe | DW048_01520 | Not Available | Negative | 322350 - 322970 | 23521.8 |
| abc-f family atpase | DW048_01525 | Not Available | Positive | 323148 - 324767 | 61289.0 |
| winged helix dna-binding domain-containing protein | DW048_01535 | Not Available | Negative | 326533 - 327585 | 40494.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

