Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatase pap2 family protein | DW048_17215 | Not Available | Negative | 3956259 - 3956812 | 21036.1 |
| protein batd | DW048_17225 | Not Available | Negative | 3957660 - 3959495 | 67767.9 |
| tetratricopeptide repeat protein | DW048_17230 | Not Available | Negative | 3959535 - 3960242 | 27631.4 |
| vwa domain-containing protein | DW048_17240 | Not Available | Negative | 3961286 - 3962284 | 37238.6 |
| hypothetical protein | DW048_17245 | Not Available | Negative | 3962304 - 3963401 | 41517.0 |
| duf58 domain-containing protein | DW048_17250 | Not Available | Negative | 3963407 - 3964276 | 33748.5 |
| atpase | DW048_17255 | Not Available | Negative | 3964526 - 3965521 | 37374.8 |
| hu family dna-binding protein | DW048_17260 | Not Available | Negative | 3965804 - 3967234 | 52641.7 |
| hu family dna-binding protein | DW048_17265 | Not Available | Negative | 3967260 - 3967532 | 10202.5 |
| 30s ribosomal protein s12 methylthiotransferase rimo | DW048_17270 | Not Available | Negative | 3967606 - 3968904 | 50090.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

