Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| paai family thioesterase | DW048_17155 | Not Available | Negative | 3944822 - 3945232 | 14751.8 |
| duf2027 domain-containing protein | DW048_17160 | Not Available | Negative | 3945260 - 3946348 | 41096.4 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | DW048_17165 | Not Available | Positive | 3946413 - 3947630 | 46274.2 |
| hypothetical protein | DW048_17170 | Not Available | Positive | 3947709 - 3947894 | 7383.37 |
| urocanate hydratase | DW048_17175 | Not Available | Positive | 3948156 - 3950153 | 74543.1 |
| formiminotransferase-cyclodeaminase | DW048_17180 | Not Available | Positive | 3950175 - 3950288 | 4348.15 |
| glutamate formimidoyltransferase | DW048_17185 | Not Available | Positive | 3950236 - 3951138 | 33369.4 |
| gxxexxy protein | DW048_17190 | Not Available | Positive | 3951156 - 3951542 | 15179.3 |
| methenyltetrahydrofolate cyclohydrolase | DW048_17200 | Not Available | Positive | 3952842 - 3953465 | 22967.8 |
| histidine ammonia-lyase | DW048_17205 | Not Available | Positive | 3953500 - 3954996 | 55193.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

