Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW048_17105 | Not Available | Negative | 3935734 - 3936276 | 19666.0 |
| signal peptidase i | DW048_17110 | Not Available | Negative | 3936430 - 3937251 | 32000.6 |
| hypothetical protein | DW048_17115 | Not Available | Negative | 3937248 - 3937826 | 22851.9 |
| hypothetical protein | DW048_17120 | Not Available | Negative | 3937823 - 3938887 | 40208.2 |
| hypothetical protein | DW048_17125 | Not Available | Negative | 3938966 - 3939226 | 9561.44 |
| electron transfer flavoprotein beta subunit/fixa family protein | DW048_17130 | Not Available | Positive | 3939593 - 3940486 | 31873.2 |
| electron transfer flavoprotein subunit alpha/fixb family protein | DW048_17135 | Not Available | Positive | 3940492 - 3941511 | 36698.3 |
| four helix bundle protein | DW048_17140 | Not Available | Positive | 3941547 - 3941927 | 14337.4 |
| acyl-coa dehydrogenase | DW048_17145 | Not Available | Positive | 3941969 - 3943675 | 63864.0 |
| histidine decarboxylase | DW048_17150 | Not Available | Positive | 3944134 - 3944742 | 22182.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

