Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombinase family protein | DW048_16985 | Not Available | Negative | 3896880 - 3898556 | 63760.1 |
| lactaldehyde reductase | DW048_16995 | Not Available | Positive | 3899522 - 3900676 | 40917.7 |
| tonb-dependent receptor | DW048_17000 | Not Available | Positive | 3900879 - 3904082 | 118624.0 |
| glycerophosphodiester phosphodiesterase | DW048_17005 | Not Available | Positive | 3904110 - 3904886 | 29006.2 |
| hypothetical protein | DW048_17010 | Not Available | Positive | 3904963 - 3905619 | 24627.2 |
| 4-hydroxy-tetrahydrodipicolinate reductase | DW048_17020 | Not Available | Positive | 3907031 - 3907786 | 27422.6 |
| s26 family signal peptidase | DW048_17025 | Not Available | Positive | 3907790 - 3909214 | 55209.5 |
| signal peptidase i | DW048_17030 | Not Available | Positive | 3909252 - 3910115 | 32796.6 |
| hypothetical protein | DW048_17035 | Not Available | Positive | 3910115 - 3910771 | 25602.4 |
| sdr family nad(p)-dependent oxidoreductase | DW048_17040 | Not Available | Positive | 3910776 - 3911588 | 28669.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

