Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW048_16935 | Not Available | Negative | 3889339 - 3889635 | 10818.2 |
| duf4007 family protein | DW048_16940 | Not Available | Negative | 3889637 - 3890488 | 32785.9 |
| xre family transcriptional regulator | DW048_16945 | Not Available | Negative | 3890494 - 3890700 | 7788.7 |
| duf3871 family protein | DW048_16950 | Not Available | Negative | 3891024 - 3892037 | 38271.8 |
| winged helix-turn-helix transcriptional regulator | DW048_16955 | Not Available | Negative | 3892240 - 3893052 | 31034.7 |
| hypothetical protein | DW048_16960 | Not Available | Negative | 3893102 - 3893287 | 7373.69 |
| hypothetical protein | DW048_16965 | Not Available | Negative | 3893594 - 3893776 | 7271.91 |
| hypothetical protein | DW048_16970 | Not Available | Positive | 3894255 - 3894353 | 3527.11 |
| hypothetical protein | DW048_16975 | Not Available | Negative | 3894682 - 3895569 | 33379.9 |
| hypothetical protein | DW048_16980 | Not Available | Negative | 3895804 - 3896820 | 40112.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

