Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW048_16805 | Not Available | Negative | 3864297 - 3865382 | 42157.1 |
| sensor histidine kinase | DW048_16810 | Not Available | Negative | 3865511 - 3865879 | 13666.3 |
| hypothetical protein | DW048_16815 | Not Available | Negative | 3866008 - 3866760 | 28907.2 |
| hypothetical protein | DW048_16820 | Not Available | Negative | 3866753 - 3867634 | 33584.0 |
| is982 family transposase | DW048_16830 | Not Available | Negative | 3868620 - 3869525 | 34961.1 |
| rna polymerase sigma-70 factor | DW048_16840 | Not Available | Positive | 3870053 - 3870568 | 20202.9 |
| duf4974 domain-containing protein | DW048_16845 | Not Available | Positive | 3870640 - 3871443 | 30715.4 |
| tonb-dependent receptor | DW048_16850 | Not Available | Positive | 3871440 - 3874004 | 97534.5 |
| duf4249 domain-containing protein | DW048_16855 | Not Available | Positive | 3874009 - 3874980 | 36496.1 |
| hypothetical protein | DW048_16860 | Not Available | Positive | 3875001 - 3875630 | 23296.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

