Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside-diphosphate kinase | DW048_16735 | Not Available | Positive | 3851997 - 3852461 | 17401.2 |
| lysm peptidoglycan-binding domain-containing protein | DW048_16740 | Not Available | Positive | 3852484 - 3853374 | 33332.2 |
| doxx family protein | DW048_16750 | Not Available | Positive | 3854019 - 3855320 | 49991.5 |
| triose-phosphate isomerase | DW048_16755 | Not Available | Positive | 3855351 - 3856106 | 26875.2 |
| gtp cyclohydrolase i fole | DW048_16765 | Not Available | Positive | 3856674 - 3857267 | 22693.7 |
| hypothetical protein | DW048_16770 | Not Available | Positive | 3857379 - 3857846 | 18389.0 |
| glycoside hydrolase family 15 | DW048_16775 | Not Available | Negative | 3858344 - 3858931 | 22912.1 |
| hypothetical protein | DW048_16780 | Not Available | Negative | 3858931 - 3860037 | 42635.9 |
| hypothetical protein | DW048_16790 | Not Available | Negative | 3861101 - 3861337 | 8752.36 |
| hypothetical protein | DW048_16800 | Not Available | Negative | 3863619 - 3864293 | 25771.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

