Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| addiction module toxin rele | DW048_16655 | Not Available | Negative | 3836357 - 3836698 | 12875.8 |
| hypothetical protein | DW048_16660 | Not Available | Negative | 3836688 - 3836963 | 10421.8 |
| exonuclease subunit sbcd | DW048_16665 | Not Available | Positive | 3837135 - 3838337 | 44927.8 |
| hypothetical protein | DW048_16675 | Not Available | Positive | 3841479 - 3841658 | 6901.7 |
| hypothetical protein | DW048_16680 | Not Available | Positive | 3841831 - 3842283 | 17226.2 |
| nad kinase | DW048_16695 | Not Available | Negative | 3844722 - 3845594 | 32172.3 |
| mota/tolq/exbb proton channel family protein | DW048_16705 | Not Available | Positive | 3846427 - 3847140 | 25739.8 |
| biopolymer transporter exbd | DW048_16710 | Not Available | Positive | 3847147 - 3847566 | 16032.8 |
| dj-1 family protein | DW048_16720 | Not Available | Positive | 3848472 - 3849023 | 19242.6 |
| atp-dependent dna helicase recg | DW048_16730 | Not Available | Positive | 3849680 - 3851776 | 79759.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

