Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW048_01410 | Not Available | Negative | 298613 - 300724 | 80786.2 |
| hypothetical protein | DW048_01415 | Not Available | Positive | 300636 - 300824 | 7558.39 |
| 2-oxoglutarate oxidoreductase | DW048_01425 | Not Available | Negative | 301373 - 302137 | 27882.8 |
| hypothetical protein | DW048_01430 | Not Available | Negative | 302156 - 302323 | 6434.4 |
| 3-methyl-2-oxobutanoate dehydrogenase subunit vorb | DW048_01435 | Not Available | Negative | 302330 - 303412 | 39184.6 |
| 4fe-4s dicluster domain-containing protein | DW048_01440 | Not Available | Negative | 303424 - 303654 | 8117.04 |
| tetratricopeptide repeat protein | DW048_01445 | Not Available | Negative | 303665 - 303961 | 11531.6 |
| duf4468 domain-containing protein | DW048_01450 | Not Available | Negative | 304326 - 305423 | 40450.4 |
| ribose 5-phosphate isomerase b | DW048_01455 | Not Available | Negative | 305530 - 305964 | 15944.1 |
| transketolase | DW048_01460 | Not Available | Negative | 305961 - 307973 | 72436.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

