Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit uvra | DW048_16535 | Not Available | Negative | 3797585 - 3800386 | 104816.0 |
| hypothetical protein | DW048_16540 | Not Available | Positive | 3800468 - 3801967 | 58057.4 |
| chromate transporter | DW048_16545 | Not Available | Negative | 3802254 - 3802826 | 21054.4 |
| chromate transporter | DW048_16550 | Not Available | Negative | 3802823 - 3803371 | 20451.8 |
| hybrid sensor histidine kinase/response regulator | DW048_16555 | Not Available | Negative | 3803376 - 3807392 | 154470.0 |
| phosphoribosylformylglycinamidine synthase | DW048_16560 | Not Available | Negative | 3807470 - 3811174 | 137172.0 |
| lyse family translocator | DW048_16565 | Not Available | Positive | 3811326 - 3811985 | 24319.7 |
| duf4924 family protein | DW048_16570 | Not Available | Positive | 3812057 - 3812599 | 21340.1 |
| peptide chain release factor 3 | DW048_16580 | Not Available | Positive | 3813477 - 3815045 | 59982.5 |
| molecular chaperone djla | DW048_16585 | Not Available | Negative | 3815120 - 3815902 | 29022.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

