Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | DW048_16485 | Not Available | Positive | 3785241 - 3786236 | 37117.2 |
| glucose-6-phosphate isomerase | DW048_16490 | Not Available | Positive | 3786250 - 3787593 | 49150.9 |
| had family hydrolase | DW048_16495 | Not Available | Positive | 3787743 - 3788477 | 27195.6 |
| rok family transcriptional regulator | DW048_16500 | Not Available | Negative | 3788518 - 3789723 | 44586.1 |
| s-layer protein | DW048_16505 | Not Available | Negative | 3789929 - 3791608 | 64188.6 |
| carbon starvation protein a | DW048_16510 | Not Available | Positive | 3791687 - 3793117 | 52225.5 |
| hypothetical protein | DW048_16515 | Not Available | Positive | 3793104 - 3793325 | 8766.94 |
| hypothetical protein | DW048_16520 | Not Available | Positive | 3793344 - 3793835 | 17873.6 |
| beta-n-acetylhexosaminidase | DW048_16525 | Not Available | Negative | 3793945 - 3796251 | 85881.2 |
| endonuclease/exonuclease/phosphatase family protein | DW048_16530 | Not Available | Negative | 3796308 - 3797339 | 39607.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

