Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf308 domain-containing protein | DW048_16375 | Not Available | Negative | 3762637 - 3763203 | 20327.0 |
| ytxh domain-containing protein | DW048_16380 | Not Available | Positive | 3763685 - 3763945 | 9298.01 |
| anthranilate synthase component i family protein | DW048_16390 | Not Available | Positive | 3765454 - 3766854 | 52812.4 |
| aminodeoxychorismate/anthranilate synthase component ii | DW048_16395 | Not Available | Positive | 3766867 - 3767457 | 21601.0 |
| anthranilate phosphoribosyltransferase | DW048_16400 | Not Available | Positive | 3767479 - 3768474 | 36463.1 |
| phosphoribosylanthranilate isomerase | DW048_16410 | Not Available | Positive | 3769313 - 3769930 | 22839.5 |
| tryptophan synthase subunit alpha | DW048_16415 | Not Available | Positive | 3769927 - 3770703 | 28988.2 |
| type i asparaginase | DW048_16420 | Not Available | Positive | 3770981 - 3772024 | 38728.6 |
| dna-binding response regulator | DW048_16425 | Not Available | Positive | 3772221 - 3772910 | 26203.9 |
| two-component sensor histidine kinase | DW048_16430 | Not Available | Positive | 3772929 - 3774710 | 68711.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

