Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deda family protein | DW048_16315 | Not Available | Negative | 3750023 - 3750667 | 24501.6 |
| hypothetical protein | DW048_16320 | Not Available | Negative | 3750800 - 3751225 | 15919.2 |
| magnesium and cobalt transport protein cora | DW048_16330 | Not Available | Negative | 3751913 - 3752953 | 40193.7 |
| transcriptional regulator | DW048_16335 | Not Available | Negative | 3753427 - 3753780 | 13527.6 |
| hypothetical protein | DW048_16340 | Not Available | Positive | 3753942 - 3754439 | 18029.8 |
| sagb/thcox family dehydrogenase | DW048_16345 | Not Available | Positive | 3754451 - 3755089 | 23258.4 |
| hypothetical protein | DW048_16355 | Not Available | Positive | 3757315 - 3758700 | 50841.8 |
| hypothetical protein | DW048_16360 | Not Available | Positive | 3758727 - 3759632 | 35114.8 |
| s9 family peptidase | DW048_16365 | Not Available | Negative | 3759689 - 3762139 | 91249.1 |
| duf4891 domain-containing protein | DW048_16370 | Not Available | Negative | 3762228 - 3762626 | 15019.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

