Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | DW048_16265 | Not Available | Negative | 3736151 - 3736879 | 27602.5 |
| duf5113 domain-containing protein | DW048_16270 | Not Available | Negative | 3736909 - 3741306 | 168916.0 |
| histone h1 | DW048_16275 | Not Available | Negative | 3741454 - 3741627 | 6352.79 |
| l-lactate permease | DW048_16280 | Not Available | Negative | 3741797 - 3743296 | 53058.6 |
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | DW048_16285 | Not Available | Negative | 3743558 - 3744844 | 46224.8 |
| duf4625 domain-containing protein | DW048_16290 | Not Available | Negative | 3745112 - 3745600 | 17879.0 |
| tonb-dependent receptor | DW048_16295 | Not Available | Negative | 3745597 - 3747756 | 82028.8 |
| hypothetical protein | DW048_16300 | Not Available | Negative | 3747805 - 3748167 | 13833.0 |
| inorganic phosphate transporter | DW048_16305 | Not Available | Negative | 3748306 - 3749319 | 36015.0 |
| duf47 domain-containing protein | DW048_16310 | Not Available | Negative | 3749336 - 3749983 | 25154.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

