Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW048_16130 | Not Available | Positive | 3708642 - 3709634 | 37662.1 |
| hypothetical protein | DW048_16135 | Not Available | Positive | 3709705 - 3710154 | 17021.0 |
| hypothetical protein | DW048_16140 | Not Available | Negative | 3710228 - 3710605 | 14874.8 |
| sigma-70 family rna polymerase sigma factor | DW048_16145 | Not Available | Negative | 3710602 - 3711147 | 21010.2 |
| hypothetical protein | DW048_16150 | Not Available | Positive | 3711292 - 3711732 | 16110.3 |
| nucleoside triphosphate pyrophosphohydrolase | DW048_16160 | Not Available | Positive | 3714646 - 3715434 | 30700.6 |
| ragb/susd family nutrient uptake outer membrane protein | DW048_16165 | Not Available | Negative | 3715628 - 3717358 | 65676.6 |
| hypothetical protein | DW048_16180 | Not Available | Negative | 3721936 - 3722274 | 12685.7 |
| sensor histidine kinase | DW048_16190 | Not Available | Negative | 3724032 - 3726035 | 75612.6 |
| j domain-containing protein | DW048_16195 | Not Available | Positive | 3726082 - 3727053 | 35196.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

