Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-[acyl-carrier-protein] thioesterase | DW048_16070 | Not Available | Positive | 3691034 - 3691777 | 28542.1 |
| ketol-acid reductoisomerase | DW048_16075 | Not Available | Positive | 3691812 - 3692855 | 38168.5 |
| energy transducer tonb | DW048_16080 | Not Available | Positive | 3692983 - 3694068 | 41925.6 |
| hlyc/corc family transporter | DW048_16090 | Not Available | Negative | 3696893 - 3698152 | 47647.0 |
| lps export abc transporter periplasmic protein lptc | DW048_16095 | Not Available | Negative | 3698166 - 3698810 | 24876.2 |
| tetratricopeptide repeat protein | DW048_16100 | Not Available | Negative | 3698813 - 3700168 | 50268.8 |
| hypothetical protein | DW048_16105 | Not Available | Negative | 3700215 - 3701531 | 49216.0 |
| type iii pantothenate kinase | DW048_16110 | Not Available | Negative | 3701518 - 3702246 | 26911.9 |
| duf4105 domain-containing protein | DW048_16115 | Not Available | Positive | 3702373 - 3703548 | 44974.2 |
| alkaline phosphatase family protein | DW048_16120 | Not Available | Positive | 3703545 - 3705128 | 59458.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

