Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase i | DW048_15960 | Not Available | Positive | 3665976 - 3668891 | 109247.0 |
| hypothetical protein | DW048_15965 | Not Available | Positive | 3668962 - 3669174 | 8022.03 |
| duf3836 domain-containing protein | DW048_15970 | Not Available | Positive | 3669201 - 3669587 | 15047.1 |
| redox-regulated atpase ychf | DW048_15975 | Not Available | Positive | 3669789 - 3670892 | 40815.9 |
| ketopantoate reductase family protein | DW048_15980 | Not Available | Positive | 3671017 - 3671928 | 33089.2 |
| chloramphenicol acetyltransferase | DW048_15990 | Not Available | Positive | 3672747 - 3673403 | 25304.1 |
| porin family protein | DW048_15995 | Not Available | Negative | 3673639 - 3674337 | 25718.4 |
| hypothetical protein | DW048_16000 | Not Available | Negative | 3674646 - 3674891 | 9220.3 |
| tetratricopeptide repeat protein | DW048_16005 | Not Available | Negative | 3675008 - 3676663 | 63859.0 |
| hypothetical protein | DW048_16010 | Not Available | Positive | 3676885 - 3677064 | 7102.69 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

