Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 37 | DW048_15840 | Not Available | Positive | 3633803 - 3635185 | 53221.9 |
| rna polymerase sigma-70 factor | DW048_15845 | Not Available | Positive | 3635188 - 3635790 | 23598.8 |
| duf4974 domain-containing protein | DW048_15850 | Not Available | Positive | 3635855 - 3636841 | 38366.9 |
| susc/raga family tonb-linked outer membrane protein | DW048_15855 | Not Available | Positive | 3636870 - 3640139 | 122381.0 |
| hybrid sensor histidine kinase/response regulator | DW048_15865 | Not Available | Positive | 3642031 - 3646353 | 165081.0 |
| duf5060 domain-containing protein | DW048_15870 | Not Available | Positive | 3646518 - 3648122 | 61910.9 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | DW048_15875 | Not Available | Positive | 3648244 - 3648858 | 22216.8 |
| deor/glpr transcriptional regulator | DW048_15880 | Not Available | Positive | 3648870 - 3649625 | 27350.1 |
| murein l,d-transpeptidase | DW048_15890 | Not Available | Positive | 3651388 - 3652407 | 38970.9 |
| hypothetical protein | DW048_15895 | Not Available | Positive | 3652410 - 3653207 | 29151.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

