Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna pseudouridine synthase | DW048_15775 | Not Available | Positive | 3614092 - 3614763 | 25519.9 |
| hypothetical protein | DW048_15780 | Not Available | Negative | 3614828 - 3615133 | 10782.8 |
| sigma-54-dependent fis family transcriptional regulator | DW048_15785 | Not Available | Negative | 3615417 - 3616799 | 51219.5 |
| hybrid sensor histidine kinase/response regulator | DW048_15790 | Not Available | Negative | 3616901 - 3619468 | 96900.3 |
| mate family efflux transporter | DW048_15795 | Not Available | Negative | 3619482 - 3620792 | 48593.3 |
| insulinase family protein | DW048_15800 | Not Available | Negative | 3620885 - 3622129 | 47363.6 |
| peptidylprolyl isomerase | DW048_15805 | Not Available | Negative | 3622142 - 3622987 | 31477.6 |
| hypothetical protein | DW048_15820 | Not Available | Positive | 3628341 - 3630698 | 88967.5 |
| arac family transcriptional regulator | DW048_15830 | Not Available | Negative | 3631848 - 3632750 | 35311.8 |
| hypothetical protein | DW048_15835 | Not Available | Positive | 3632962 - 3633642 | 24715.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

