Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 3536656 - 3536731 | Not Available |
| hypothetical protein | DW048_15540 | Not Available | Positive | 3536934 - 3537320 | 15254.1 |
| yjgp/yjgq family permease | DW048_15545 | Not Available | Positive | 3537404 - 3539302 | 72557.6 |
| bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase ii | DW048_15550 | Not Available | Positive | 3539305 - 3540519 | 44935.4 |
| pyridoxal phosphate-dependent aminotransferase | DW048_15555 | Not Available | Positive | 3540645 - 3541838 | 43038.4 |
| 4fe-4s dicluster domain-containing protein | DW048_15560 | Not Available | Negative | 3542016 - 3542183 | 5717.65 |
| beta-n-acetylglucosaminidase | DW048_15565 | Not Available | Negative | 3542286 - 3545279 | 112130.0 |
| bifunctional metallophosphatase/5'-nucleotidase | DW048_15570 | Not Available | Negative | 3545325 - 3546167 | 31282.2 |
| 5'-nucleotidase | DW048_15575 | Not Available | Negative | 3546179 - 3546958 | 27870.5 |
| 50s ribosomal protein l19 | DW048_15580 | Not Available | Positive | 3547156 - 3547509 | 13130.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

