Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific dna-methyltransferase | DW048_15410 | Not Available | Negative | 3513584 - 3514003 | 15693.0 |
| duf1738 domain-containing protein | DW048_15420 | Not Available | Negative | 3514119 - 3515903 | 68116.4 |
| hypothetical protein | DW048_15425 | Not Available | Negative | 3515906 - 3516523 | 23399.9 |
| glucosaminidase | DW048_15430 | Not Available | Negative | 3516570 - 3518084 | 55622.7 |
| hypothetical protein | DW048_15445 | Not Available | Negative | 3522578 - 3522874 | 11661.9 |
| dna (cytosine-5-)-methyltransferase | DW048_15455 | Not Available | Negative | 3523723 - 3524985 | 48381.5 |
| radical sam protein | DW048_15460 | Not Available | Negative | 3524963 - 3525916 | 36873.0 |
| antitoxin | DW048_15465 | Not Available | Negative | 3525971 - 3526612 | 21779.6 |
| hypothetical protein | DW048_15470 | Not Available | Negative | 3526655 - 3527341 | 26256.1 |
| ph domain-containing protein | DW048_15480 | Not Available | Negative | 3528032 - 3528517 | 18819.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

