Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa hydrolase/transferase family protein | DW048_15275 | Not Available | Positive | 3486578 - 3488071 | 54010.7 |
| glycoside hydrolase family 3 protein | DW048_15280 | Not Available | Positive | 3488257 - 3490851 | 96045.1 |
| abc transporter atp-binding protein | DW048_15285 | Not Available | Negative | 3490940 - 3492532 | 59359.8 |
| site-specific integrase | DW048_15300 | Not Available | Positive | 3495863 - 3496403 | 21137.7 |
| group ii intron reverse transcriptase/maturase | DW048_15305 | Not Available | Positive | 3496404 - 3497219 | 31998.0 |
| dna methylase | DW048_15310 | Not Available | Positive | 3497203 - 3498288 | 41214.1 |
| hypothetical protein | DW048_15315 | Not Available | Negative | 3498391 - 3498642 | 9351.3 |
| hypothetical protein | DW048_15320 | Not Available | Negative | 3498787 - 3498999 | 8517.49 |
| parb/repb/spo0j family partition protein | DW048_15325 | Not Available | Positive | 3499039 - 3500760 | 65107.5 |
| hypothetical protein | DW048_15335 | Not Available | Positive | 3501544 - 3501828 | 11267.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

