Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW048_15210 | Not Available | Positive | 3476171 - 3477694 | 57695.4 |
| hypothetical protein | DW048_15215 | Not Available | Positive | 3477675 - 3478469 | 30456.2 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | DW048_15225 | Not Available | Negative | 3479057 - 3480112 | 40182.2 |
| trna pseudouridine(55) synthase trub | DW048_15230 | Not Available | Negative | 3480124 - 3480831 | 26665.4 |
| duf3098 domain-containing protein | DW048_15240 | Not Available | Negative | 3481673 - 3481918 | 9145.44 |
| abc transporter permease | DW048_15245 | Not Available | Negative | 3481931 - 3482800 | 32650.6 |
| class i sam-dependent methyltransferase | DW048_15250 | Not Available | Negative | 3482803 - 3483669 | 33272.9 |
| pspc domain-containing protein | DW048_15255 | Not Available | Positive | 3483837 - 3484073 | 9155.18 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | DW048_15260 | Not Available | Negative | 3484083 - 3484484 | 15118.3 |
| hypothetical protein | DW048_15270 | Not Available | Positive | 3486190 - 3486540 | 13499.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

