Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4925 domain-containing protein | DW048_15100 | Not Available | Positive | 3451526 - 3452731 | 43424.5 |
| port family protein | DW048_15105 | Not Available | Negative | 3453586 - 3454362 | 29116.1 |
| hypothetical protein | DW048_15110 | Not Available | Negative | 3454371 - 3455519 | 42381.6 |
| glutamate dehydrogenase | DW048_15115 | Not Available | Negative | 3455675 - 3456556 | 31568.9 |
| transposase | DW048_15120 | Not Available | Positive | 3456557 - 3456630 | 2806.53 |
| Trna-gln | Not Available | Not Available | Positive | 3456799 - 3456869 | Not Available |
| peptidase s41 | DW048_15130 | Not Available | Positive | 3457004 - 3460258 | 121930.0 |
| hydrolase tatd | DW048_15140 | Not Available | Negative | 3461754 - 3462383 | 24010.2 |
| membrane protein insertion efficiency factor yidd | DW048_15145 | Not Available | Negative | 3462398 - 3462619 | 8364.46 |
| ribonuclease p protein component | DW048_15150 | Not Available | Negative | 3462616 - 3463008 | 15158.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

