Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| blai/meci/copy family transcriptional regulator | DW048_15030 | Not Available | Negative | 3434502 - 3434867 | 14087.0 |
| copper homeostasis protein | DW048_15035 | Not Available | Negative | 3435053 - 3435481 | 15858.6 |
| abc transporter permease | DW048_15040 | Not Available | Negative | 3435517 - 3436767 | 47511.7 |
| abc transporter permease | DW048_15045 | Not Available | Negative | 3436782 - 3437957 | 44227.0 |
| biotin/lipoyl-binding protein | DW048_15050 | Not Available | Negative | 3437964 - 3438950 | 35945.9 |
| hypothetical protein | DW048_15060 | Not Available | Negative | 3440654 - 3441526 | 33451.4 |
| chromosome partitioning protein parb | DW048_15075 | Not Available | Negative | 3444531 - 3445043 | 19744.9 |
| duf3440 domain-containing protein | DW048_15080 | Not Available | Negative | 3445040 - 3446341 | 52313.9 |
| hypothetical protein | DW048_15085 | Not Available | Negative | 3446334 - 3446726 | 15101.9 |
| phosphoenolpyruvate synthase | DW048_15095 | Not Available | Positive | 3448459 - 3451416 | 112927.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

