Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3244 domain-containing protein | DW048_14970 | Not Available | Negative | 3421011 - 3421415 | 14848.9 |
| tetratricopeptide repeat protein | DW048_14975 | Not Available | Negative | 3421574 - 3423430 | 72895.5 |
| mate family efflux transporter | DW048_14985 | Not Available | Negative | 3424342 - 3425712 | 49490.1 |
| serine protease | DW048_14990 | Not Available | Positive | 3425834 - 3427207 | 49974.9 |
| exodeoxyribonuclease vii large subunit | DW048_14995 | Not Available | Positive | 3427207 - 3428514 | 49535.8 |
| exodeoxyribonuclease vii small subunit | DW048_15000 | Not Available | Positive | 3428523 - 3428726 | 7823.46 |
| duf975 family protein | DW048_15010 | Not Available | Positive | 3429943 - 3430569 | 23245.0 |
| trna (guanosine(46)-n7)-methyltransferase trmb | DW048_15015 | Not Available | Positive | 3430692 - 3431450 | 29773.6 |
| mrp family atp-binding protein | DW048_15020 | Not Available | Positive | 3431461 - 3432561 | 39645.1 |
| tonb family protein | DW048_15025 | Not Available | Negative | 3432629 - 3434479 | 69497.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

