Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mate family efflux transporter | DW048_14895 | Not Available | Positive | 3408711 - 3410063 | 49552.6 |
| crp/fnr family transcriptional regulator | DW048_14900 | Not Available | Positive | 3410099 - 3410683 | 22223.6 |
| carbonic anhydrase | DW048_14905 | Not Available | Positive | 3410874 - 3411413 | 19937.5 |
| glycosyl hydrolase family 109 protein 1 | DW048_14910 | Not Available | Negative | 3411537 - 3412952 | 53465.8 |
| hypothetical protein | DW048_14920 | Not Available | Positive | 3413484 - 3413687 | 8126.12 |
| duf3795 domain-containing protein | DW048_14935 | Not Available | Positive | 3414877 - 3415221 | 13108.9 |
| glutamine amidotransferase | DW048_14940 | Not Available | Positive | 3415224 - 3415841 | 22787.4 |
| hypothetical protein | DW048_14945 | Not Available | Positive | 3415944 - 3416150 | 7690.22 |
| peptidase c39 | DW048_14960 | Not Available | Negative | 3419233 - 3419820 | 23231.6 |
| hypothetical protein | DW048_14965 | Not Available | Negative | 3419941 - 3420867 | 35832.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

