Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | DW048_14830 | Not Available | Negative | 3396051 - 3396392 | 13328.3 |
| dna-binding protein | DW048_14835 | Not Available | Negative | 3396436 - 3396804 | 14432.2 |
| hypothetical protein | DW048_14840 | Not Available | Negative | 3396938 - 3397666 | 28244.0 |
| dna-binding protein | DW048_14850 | Not Available | Negative | 3399146 - 3399712 | 22155.2 |
| [fefe] hydrogenase h-cluster maturation gtpase hydf | DW048_14860 | Not Available | Negative | 3400713 - 3401903 | 43883.6 |
| [fefe] hydrogenase h-cluster radical sam maturase hydg | DW048_14865 | Not Available | Negative | 3401967 - 3403385 | 53347.0 |
| [fefe] hydrogenase h-cluster radical sam maturase hyde | DW048_14870 | Not Available | Negative | 3403398 - 3404432 | 38858.7 |
| 4fe-4s dicluster domain-containing protein | DW048_14875 | Not Available | Negative | 3404441 - 3405907 | 54223.4 |
| co-chaperone groes | DW048_14880 | Not Available | Positive | 3406288 - 3406560 | 9740.92 |
| Trna-thr | Not Available | Not Available | Positive | 3408486 - 3408559 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

