Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porin family protein | DW048_01220 | Not Available | Negative | 249572 - 250198 | 23479.7 |
| duf4136 domain-containing protein | DW048_01225 | Not Available | Negative | 250240 - 250878 | 24032.2 |
| copper homeostasis protein | DW048_01230 | Not Available | Negative | 251002 - 251490 | 17235.4 |
| peptidase s41 | DW048_01235 | Not Available | Negative | 251648 - 253045 | 52284.8 |
| aspartate-alanine antiporter | DW048_01245 | Not Available | Negative | 254853 - 256553 | 61084.5 |
| hypothetical protein | DW048_01250 | Not Available | Positive | 256679 - 257503 | 31736.7 |
| tetratricopeptide repeat protein | DW048_01255 | Not Available | Negative | 257495 - 259672 | 86004.3 |
| duf418 domain-containing protein | DW048_01260 | Not Available | Negative | 259734 - 260918 | 45002.6 |
| tonb family protein | DW048_01270 | Not Available | Positive | 264655 - 265341 | 25600.7 |
| amidohydrolase | DW048_01275 | Not Available | Positive | 265533 - 266294 | 28451.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

