Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5045 domain-containing protein | DW048_14765 | Not Available | Negative | 3382290 - 3383012 | 26908.5 |
| hypothetical protein | DW048_14770 | Not Available | Negative | 3383081 - 3383806 | 28156.7 |
| trag family conjugative transposon atpase | DW048_14780 | Not Available | Negative | 3386581 - 3389286 | 103802.0 |
| duf4133 domain-containing protein | DW048_14785 | Not Available | Negative | 3389409 - 3389708 | 10838.5 |
| duf4134 domain-containing protein | DW048_14790 | Not Available | Negative | 3389757 - 3390122 | 12814.1 |
| duf4134 domain-containing protein | DW048_14795 | Not Available | Negative | 3390181 - 3390513 | 11838.8 |
| hypothetical protein | DW048_14800 | Not Available | Negative | 3390510 - 3390962 | 16888.6 |
| serine/threonine protein phosphatase | DW048_14805 | Not Available | Negative | 3391184 - 3391954 | 29662.8 |
| dna primase | DW048_14820 | Not Available | Negative | 3393842 - 3394741 | 34979.7 |
| mobilization protein | DW048_14825 | Not Available | Negative | 3394942 - 3396054 | 42178.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

