Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 1 | DW048_14710 | Not Available | Negative | 3370187 - 3371302 | 42032.6 |
| hypothetical protein | DW048_14715 | Not Available | Negative | 3371286 - 3371564 | 10749.0 |
| phosphoribosylformylglycinamidine cyclo-ligase | DW048_14720 | Not Available | Negative | 3371545 - 3372714 | 42663.2 |
| kila-n domain-containing protein | DW048_14725 | Not Available | Positive | 3373950 - 3374756 | 31040.4 |
| duf2867 domain-containing protein | DW048_14730 | Not Available | Positive | 3374762 - 3375199 | 17026.6 |
| class i sam-dependent methyltransferase | DW048_14735 | Not Available | Positive | 3375223 - 3375968 | 29274.9 |
| abc transporter atp-binding protein | DW048_14740 | Not Available | Positive | 3376241 - 3378013 | 65712.0 |
| abc transporter atp-binding protein | DW048_14745 | Not Available | Positive | 3378015 - 3379757 | 64900.3 |
| hypothetical protein | DW048_14755 | Not Available | Negative | 3380999 - 3381400 | 15808.5 |
| hypothetical protein | DW048_14760 | Not Available | Negative | 3381416 - 3382246 | 32091.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

