Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW048_14565 | Not Available | Negative | 3330445 - 3330633 | 6688.22 |
| radical sam protein | DW048_14570 | Not Available | Negative | 3331166 - 3331942 | 29335.2 |
| duf4294 domain-containing protein | DW048_14580 | Not Available | Positive | 3334156 - 3334728 | 22062.0 |
| trmh family rna methyltransferase | DW048_14585 | Not Available | Negative | 3334759 - 3335295 | 20012.2 |
| hypothetical protein | DW048_14590 | Not Available | Positive | 3335591 - 3337192 | 60937.2 |
| hypothetical protein | DW048_14595 | Not Available | Positive | 3337619 - 3338527 | 34990.9 |
| glycoside hydrolase | DW048_14605 | Not Available | Positive | 3340409 - 3341794 | 52222.6 |
| serine hydrolase | DW048_14615 | Not Available | Positive | 3343919 - 3345004 | 39716.5 |
| hypothetical protein | DW048_14620 | Not Available | Positive | 3345011 - 3347647 | 98731.6 |
| glucuronyl hydrolase | DW048_14635 | Not Available | Positive | 3351545 - 3352768 | 46623.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

