Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4859 domain-containing protein | DW048_14485 | Not Available | Negative | 3301828 - 3304092 | 84286.4 |
| duf4859 domain-containing protein | DW048_14490 | Not Available | Negative | 3304348 - 3305358 | 36202.2 |
| hypothetical protein | DW048_14505 | Not Available | Positive | 3310309 - 3310608 | 11658.8 |
| hypothetical protein | DW048_14510 | Not Available | Positive | 3310583 - 3311164 | 22477.9 |
| glycoside hydrolase family 27 protein | DW048_14535 | Not Available | Positive | 3320568 - 3321815 | 47417.8 |
| hypothetical protein | DW048_14540 | Not Available | Positive | 3321815 - 3323182 | 53067.9 |
| hybrid sensor histidine kinase/response regulator | DW048_14545 | Not Available | Positive | 3323366 - 3327352 | 150385.0 |
| rubrerythrin family protein | DW048_14550 | Not Available | Negative | 3327446 - 3328024 | 21626.4 |
| duf4884 domain-containing protein | DW048_14555 | Not Available | Positive | 3328205 - 3328474 | 10182.1 |
| stas domain-containing protein | DW048_14560 | Not Available | Positive | 3328573 - 3330255 | 60560.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

