Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DW048_14425 | Not Available | Positive | 3282648 - 3283904 | 46624.1 |
| abc transporter permease | DW048_14430 | Not Available | Positive | 3283909 - 3285150 | 45551.9 |
| efflux rnd transporter periplasmic adaptor subunit | DW048_14435 | Not Available | Positive | 3285224 - 3286318 | 40051.5 |
| hypothetical protein | DW048_14445 | Not Available | Negative | 3287804 - 3288757 | 38492.4 |
| iron-containing alcohol dehydrogenase | DW048_14455 | Not Available | Positive | 3289790 - 3291184 | 51620.1 |
| hypothetical protein | DW048_14460 | Not Available | Positive | 3291261 - 3291467 | 7773.75 |
| s9 family peptidase | DW048_14465 | Not Available | Negative | 3291736 - 3293979 | 85703.8 |
| glycoside hydrolase family 127 protein | DW048_14470 | Not Available | Negative | 3293991 - 3296396 | 89548.8 |
| glycoside hydrolase | DW048_14475 | Not Available | Negative | 3296467 - 3298869 | 89965.0 |
| glycoside hydrolase family 97 protein | DW048_14480 | Not Available | Negative | 3298906 - 3301629 | 103325.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

