Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW048_14235 | Not Available | Negative | 3230869 - 3231597 | 28536.1 |
| hypothetical protein | DW048_14240 | Not Available | Positive | 3231623 - 3232066 | 17109.1 |
| duf4491 family protein | DW048_14245 | Not Available | Negative | 3232266 - 3232580 | 12155.1 |
| asnc family transcriptional regulator | DW048_14250 | Not Available | Negative | 3232587 - 3233045 | 17087.9 |
| hypothetical protein | DW048_14255 | Not Available | Negative | 3233162 - 3233545 | 15190.0 |
| hlyc/corc family transporter | DW048_14260 | Not Available | Negative | 3233568 - 3234854 | 48001.9 |
| nudix domain-containing protein | DW048_14265 | Not Available | Positive | 3234989 - 3235513 | 19815.6 |
| tonb-dependent receptor | DW048_14275 | Not Available | Positive | 3238449 - 3240146 | 64308.7 |
| type i dna topoisomerase | DW048_14280 | Not Available | Positive | 3240268 - 3242706 | 91433.3 |
| shikimate kinase | DW048_14285 | Not Available | Positive | 3242703 - 3243230 | 20453.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

