Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | DW048_14185 | Not Available | Negative | 3218691 - 3219374 | 26151.8 |
| sensor histidine kinase | DW048_14190 | Not Available | Negative | 3219379 - 3220917 | 59528.5 |
| tonb-dependent receptor | DW048_14195 | Not Available | Positive | 3220969 - 3223041 | 79153.4 |
| sufe family protein | DW048_14200 | Not Available | Negative | 3223077 - 3223505 | 16169.5 |
| glutamine cyclotransferase | DW048_14205 | Not Available | Negative | 3223517 - 3224521 | 37857.6 |
| fused gamma-glutamyl-gamma-aminobutyrate hydrolase/peptidase | DW048_14210 | Not Available | Negative | 3224589 - 3226346 | 64886.2 |
| phosphate butyryltransferase | DW048_14215 | Not Available | Positive | 3226429 - 3227337 | 33285.3 |
| butyrate kinase | DW048_14220 | Not Available | Positive | 3227436 - 3228500 | 38268.3 |
| helicase | DW048_14225 | Not Available | Negative | 3228638 - 3229888 | 48035.2 |
| hypothetical protein | DW048_14230 | Not Available | Negative | 3230618 - 3230926 | 12084.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

