Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit gamma/tau | DW048_01165 | Not Available | Negative | 236536 - 238347 | 67581.0 |
| septum formation initiator family protein | DW048_01170 | Not Available | Positive | 238466 - 238762 | 11882.5 |
| hypothetical protein | DW048_01175 | Not Available | Positive | 238786 - 239103 | 12033.2 |
| s46 family peptidase | DW048_01185 | Not Available | Negative | 241406 - 243571 | 81229.1 |
| duf4369 domain-containing protein | DW048_01190 | Not Available | Positive | 243786 - 244463 | 25343.6 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | DW048_01195 | Not Available | Negative | 244477 - 245235 | 28672.5 |
| metallophosphoesterase | DW048_01200 | Not Available | Negative | 245275 - 246435 | 43757.5 |
| 5-methyltetrahydrofolate--homocysteine methyltransferase | DW048_01205 | Not Available | Negative | 246450 - 247337 | 33449.9 |
| dihydroorotase | DW048_01210 | Not Available | Negative | 247334 - 248674 | 49648.4 |
| polyprenol monophosphomannose synthase | DW048_01215 | Not Available | Negative | 248671 - 249420 | 28494.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

