Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | DW048_14130 | Not Available | Negative | 3211307 - 3211549 | 9406.26 |
| hypothetical protein | DW048_14135 | Not Available | Negative | 3212051 - 3212254 | 7696.4 |
| hypothetical protein | DW048_14145 | Not Available | Negative | 3213942 - 3214439 | 18607.8 |
| hypothetical protein | DW048_14150 | Not Available | Negative | 3214452 - 3215099 | 24488.9 |
| hypothetical protein | DW048_14155 | Not Available | Positive | 3215279 - 3215527 | 9253.75 |
| hypothetical protein | DW048_14160 | Not Available | Positive | 3215732 - 3215950 | 8004.92 |
| thioredoxin | DW048_14165 | Not Available | Positive | 3215953 - 3216432 | 17688.5 |
| transcriptional regulator | DW048_14170 | Not Available | Positive | 3216470 - 3216817 | 13307.3 |
| d-alanyl-d-alanine dipeptidase | DW048_14175 | Not Available | Positive | 3216841 - 3217506 | 25264.8 |
| sam-dependent methyltransferase | DW048_14180 | Not Available | Positive | 3217510 - 3218694 | 43754.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

