Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l32 | DW048_13880 | Not Available | Negative | 3155664 - 3155849 | 6838.3 |
| duf177 domain-containing protein | DW048_13885 | Not Available | Negative | 3155861 - 3156394 | 19819.5 |
| hypothetical protein | DW048_13890 | Not Available | Negative | 3156729 - 3156923 | 7020.47 |
| citrate/2-methylcitrate synthase | DW048_13900 | Not Available | Negative | 3158481 - 3159824 | 51062.6 |
| helicase | DW048_13915 | Not Available | Positive | 3163399 - 3165291 | 72732.5 |
| hypothetical protein | DW048_13925 | Not Available | Negative | 3166081 - 3166947 | 33156.5 |
| dna topoisomerase iii | DW048_13930 | Not Available | Positive | 3167221 - 3169362 | 79898.0 |
| rrna cytosine-c5-methyltransferase | DW048_13935 | Not Available | Negative | 3169499 - 3170926 | 53395.1 |
| hypothetical protein | DW048_13940 | Not Available | Positive | 3171058 - 3171765 | 26006.5 |
| sigma-70 family rna polymerase sigma factor | DW048_13945 | Not Available | Positive | 3171768 - 3172316 | 21091.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

