Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | DW048_13625 | Not Available | Negative | 3094408 - 3095316 | 35343.4 |
| gnat family n-acetyltransferase | DW048_13635 | Not Available | Positive | 3095987 - 3096787 | 30582.8 |
| flavin reductase family protein | DW048_13650 | Not Available | Positive | 3098877 - 3099437 | 20230.2 |
| precorrin-3b c(17)-methyltransferase | DW048_13655 | Not Available | Positive | 3100117 - 3101523 | 51836.8 |
| bifunctional cobalt-precorrin-7 (c(5))-methyltransferase/cobalt-precorrin-6b (c(15))-methyltransferase | DW048_13660 | Not Available | Positive | 3101528 - 3102709 | 44306.8 |
| precorrin-4 c(11)-methyltransferase | DW048_13665 | Not Available | Positive | 3102731 - 3104542 | 67065.4 |
| cobalt-precorrin-5b (c(1))-methyltransferase | DW048_13670 | Not Available | Positive | 3104568 - 3106364 | 65997.2 |
| iron abc transporter permease | DW048_13680 | Not Available | Negative | 3107407 - 3108444 | 36701.7 |
| iron abc transporter substrate-binding protein | DW048_13685 | Not Available | Negative | 3108456 - 3109607 | 43289.9 |
| precorrin-2 c(20)-methyltransferase | DW048_13690 | Not Available | Positive | 3109711 - 3110439 | 27466.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

