Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobyrinate a,c-diamide synthase | DW048_13550 | Not Available | Negative | 3069737 - 3071065 | 49093.6 |
| putative transporter | DW048_13555 | Not Available | Positive | 3071301 - 3072989 | 60780.7 |
| tonb-dependent receptor | DW048_13560 | Not Available | Positive | 3073382 - 3075559 | 81329.7 |
| tonb-dependent receptor | DW048_13565 | Not Available | Positive | 3075932 - 3077992 | 78316.4 |
| ribonucleotide-diphosphate reductase subunit beta | DW048_13585 | Not Available | Positive | 3082468 - 3083517 | 41348.8 |
| methylenetetrahydrofolate reductase | DW048_13590 | Not Available | Negative | 3083608 - 3084560 | 36820.5 |
| tonb-dependent receptor | DW048_13595 | Not Available | Negative | 3084857 - 3087160 | 85921.1 |
| tonb-dependent receptor | DW048_13605 | Not Available | Positive | 3088088 - 3090265 | 81219.4 |
| abc transporter substrate-binding protein | DW048_13610 | Not Available | Positive | 3090279 - 3091436 | 43483.4 |
| 1-deoxy-d-xylulose-5-phosphate synthase | DW048_13615 | Not Available | Negative | 3091543 - 3093303 | 64656.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

